Package: animovement 0.4.1
Mikkel Roald-Arbøl
animovement: An R toolbox for analysing animal movement across space and time
An R toolbox for analysing animal movement across space and time.
Authors:
animovement_0.4.1.tar.gz
animovement_0.4.1.zip(r-4.5)animovement_0.4.1.zip(r-4.4)animovement_0.4.1.zip(r-4.3)
animovement_0.4.1.tgz(r-4.4-any)animovement_0.4.1.tgz(r-4.3-any)
animovement_0.4.1.tar.gz(r-4.5-noble)animovement_0.4.1.tar.gz(r-4.4-noble)
animovement_0.4.1.tgz(r-4.4-emscripten)animovement_0.4.1.tgz(r-4.3-emscripten)
animovement.pdf |animovement.html✨
animovement/json (API)
NEWS
| # Install 'animovement' in R: |
| install.packages('animovement', repos = c('https://roaldarbol.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/roaldarbol/animovement/issues
animal-behaviouranimal-movementneuroethologyneuroscience
Last updated 10 days agofrom:f87c0081ad. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 13 2024 |
| R-4.5-win | OK | Nov 13 2024 |
| R-4.5-linux | OK | Nov 13 2024 |
| R-4.4-win | OK | Nov 13 2024 |
| R-4.4-mac | OK | Nov 13 2024 |
| R-4.3-win | OK | Nov 13 2024 |
| R-4.3-mac | OK | Nov 13 2024 |
Exports:calculate_kinematicscalculate_statisticscalculate_straightnessclean_kinematicsdoes_file_have_expected_headersensure_file_has_expected_headersensure_file_has_headersgroup_everyread_animaltaread_bonsairead_deeplabcutread_idtrackerread_lightningposeread_movementread_sleapread_trackballread_treadmillread_trexsmooth_trackvalidate_animaltavalidate_deeplabcut_csvvalidate_filesvalidate_timevalidate_trackball
Dependencies:bitbit64bootcircularclicollapsecpp11crayondplyrfansigenericsgluehmsjanitorlatticelifecyclelubridatemagrittrmvtnormpillarpkgconfigprettyunitsprogresspurrrR6Rcpprhdf5rhdf5filtersRhdf5librlangsnakecasestringistringrtibbletidyrtidyselecttimechangetzdbutf8vctrsvroomwithrzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate kinematics | calculate_kinematics |
| Calculate summary statistics | calculate_statistics |
| Clean kinematics | clean_kinematics |
| Group every N observations together | group_every |
| Read AnimalTA data | read_animalta |
| Read centroid tracking data from Bonsai | read_bonsai |
| Read DeepLabCut data | read_deeplabcut |
| Read idtracker.ai data | read_idtracker |
| Read LightningPose data | read_lightningpose |
| Read movement data | read_movement |
| Read SLEAP data | read_sleap |
| Read trackball data | read_trackball |
| Read treadmill data | read_treadmill |
| Read TRex data | read_trex |
| Smooth tracks | smooth_track |